Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc1P18828 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.39□□□□□ -1.71
Sdc1P18828 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sdc1P18828 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm18908-201ENSMUST00000207125 1483 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm25346-201ENSMUST00000104509 128 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm14788-201ENSMUST00000119457 375 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm14619-201ENSMUST00000120480 168 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm14620-201ENSMUST00000120656 383 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm7973-201ENSMUST00000122107 488 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm23354-201ENSMUST00000158426 104 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm16566-201ENSMUST00000160387 910 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm4134-201ENSMUST00000173244 563 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.39□□□□□ -1.71
Sdc1P18828 Mir6992-201ENSMUST00000183342 109 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm37439-201ENSMUST00000193150 856 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm5050-201ENSMUST00000197164 775 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Trav3n-2-201ENSMUST00000197693 334 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Trav3d-2-201ENSMUST00000199874 334 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.39□□□□□ -1.71
Sdc1P18828 Gm44261-201ENSMUST00000203337 209 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm5314-201ENSMUST00000204852 466 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm45448-201ENSMUST00000211739 209 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC4.39□□□□□ -1.71
Sdc1P18828 AC154642.1-201ENSMUST00000224173 740 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 AC161275.1-201ENSMUST00000224668 208 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 AC106830.2-201ENSMUST00000226624 943 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Sdc1P18828 n-R5s58-201ENSMUST00000093682 119 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sdc1P18828 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Sdc1P18828 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sdc1P18828 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.39□□□□□ -1.71
Sdc1P18828 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.39□□□□□ -1.71
Sdc1P18828 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Sdc1P18828 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sdc1P18828 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm8424-201ENSMUST00000117716 988 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm13702-201ENSMUST00000118542 825 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm6427-201ENSMUST00000118721 979 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm13532-201ENSMUST00000120373 240 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm13738-201ENSMUST00000122437 469 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Gm2976-201ENSMUST00000160362 513 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm21909-201ENSMUST00000178260 439 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Mir7029-201ENSMUST00000184777 61 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC4.38□□□□□ -1.71
Sdc1P18828 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sdc1P18828 Ighv1-14-201ENSMUST00000194015 402 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Ighv1-17-201ENSMUST00000194435 350 ntBASIC4.38□□□□□ -1.71
Sdc1P18828 Gm37871-201ENSMUST00000194973 688 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms