Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Gm18194-202ENSMUST00000210952 3442 ntBASIC5.82□□□□□ -1.48
Hoxd3P09027 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxd3P09027 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxd3P09027 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm37321-201ENSMUST00000195742 1872 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Hoxd3P09027 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm25546-201ENSMUST00000103977 132 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm23527-201ENSMUST00000104570 130 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm14173-201ENSMUST00000117690 278 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm13085-201ENSMUST00000118356 171 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm14534-201ENSMUST00000120045 357 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm13356-201ENSMUST00000121678 335 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm6632-201ENSMUST00000168425 954 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm18808-201ENSMUST00000173316 462 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm23187-201ENSMUST00000175746 86 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mir7058-201ENSMUST00000184637 75 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm18553-201ENSMUST00000194152 634 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm43355-201ENSMUST00000196541 346 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm43070-201ENSMUST00000196938 415 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm4605-201ENSMUST00000203148 625 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm2676-201ENSMUST00000207279 606 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm19880-201ENSMUST00000207731 318 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm7394-201ENSMUST00000209138 1032 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm45870-201ENSMUST00000211269 601 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm32842-201ENSMUST00000212653 738 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm9088-201ENSMUST00000220237 508 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 AC132587.1-201ENSMUST00000220562 166 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm4263-202ENSMUST00000221392 667 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.81□□□□□ -1.48
Hoxd3P09027 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 CT009550.2-201ENSMUST00000228851 399 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm17165-201ENSMUST00000096155 493 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.81□□□□□ -1.48
Hoxd3P09027 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxd3P09027 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxd3P09027 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms