Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn5O54942 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.73□□□□□ -1.49
Cldn5O54942 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn5O54942 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Cldn5O54942 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm25919-201ENSMUST00000104271 132 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm8595-201ENSMUST00000118250 630 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.72□□□□□ -1.49
Cldn5O54942 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm15812-201ENSMUST00000162331 748 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.72□□□□□ -1.49
Cldn5O54942 Mir3110-201ENSMUST00000175053 80 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm43629-201ENSMUST00000201782 704 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm7768-201ENSMUST00000222988 597 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.72□□□□□ -1.49
Cldn5O54942 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn5O54942 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.72□□□□□ -1.49
Cldn5O54942 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn5O54942 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cldn5O54942 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn5O54942 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Cldn5O54942 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.71□□□□□ -1.49
Cldn5O54942 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Cldn5O54942 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Cldn5O54942 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cldn5O54942 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm14610-201ENSMUST00000118358 966 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm11825-201ENSMUST00000120710 736 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm24295-201ENSMUST00000158298 131 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm24363-201ENSMUST00000158440 311 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Mir3473a-201ENSMUST00000175011 78 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm21959-201ENSMUST00000178439 452 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
Cldn5O54942 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm43554-201ENSMUST00000199987 186 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm2099-201ENSMUST00000220979 412 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm32526-201ENSMUST00000221878 981 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Cldn5O54942 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cldn5O54942 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Mir337-201ENSMUST00000083592 97 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cldn5O54942 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cldn5O54942 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cldn5O54942 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cldn5O54942 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.71□□□□□ -1.5
Cldn5O54942 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms