Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm11774-201ENSMUST00000118601 293 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm3931-201ENSMUST00000119038 455 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm7931-201ENSMUST00000121537 271 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm22492-201ENSMUST00000157192 297 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm8185-201ENSMUST00000160999 669 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm16298-201ENSMUST00000161107 420 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm20778-201ENSMUST00000178524 627 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm37492-201ENSMUST00000191948 376 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm43444-201ENSMUST00000198123 291 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm43233-201ENSMUST00000200491 616 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm43946-201ENSMUST00000204058 886 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm45845-201ENSMUST00000207326 582 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm45185-201ENSMUST00000207556 404 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm5055-201ENSMUST00000215697 581 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm6362-201ENSMUST00000217686 836 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 AC140930.1-201ENSMUST00000221889 389 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Hmgb3O54879 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm22155-201ENSMUST00000083836 162 ntBASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmgb3O54879 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Hmgb3O54879 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.34□□□□□ -1.72
Hmgb3O54879 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Hmgb3O54879 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.34□□□□□ -1.72
Hmgb3O54879 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Hmgb3O54879 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmgb3O54879 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm15185-201ENSMUST00000117397 746 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm13503-201ENSMUST00000119017 446 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm15741-201ENSMUST00000119401 754 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm16423-201ENSMUST00000120078 947 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm7746-201ENSMUST00000120966 503 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm5125-201ENSMUST00000148614 624 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm3170-201ENSMUST00000168753 850 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm3348-201ENSMUST00000177813 850 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm27266-201ENSMUST00000184521 123 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Ighv1-21-201ENSMUST00000194856 351 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm17834-201ENSMUST00000204322 891 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Gm19095-201ENSMUST00000220533 730 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 CT025579.4-201ENSMUST00000224598 627 ntBASIC4.33□□□□□ -1.72
Hmgb3O54879 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hmgb3O54879 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmgb3O54879 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms