Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm11617-201ENSMUST00000119609 639 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm12287-201ENSMUST00000119770 707 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm23211-201ENSMUST00000122717 308 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm37631-201ENSMUST00000192275 364 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm9278-201ENSMUST00000205508 553 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rrp8Q9DB85 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm11550-201ENSMUST00000118210 699 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm37421-201ENSMUST00000193088 132 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm45156-201ENSMUST00000207255 439 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm7887-201ENSMUST00000056948 537 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm9386-201ENSMUST00000095195 381 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm10540-201ENSMUST00000097581 276 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Rrp8Q9DB85 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.43□□□□□ -1.54
Rrp8Q9DB85 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm11774-201ENSMUST00000118601 293 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm3053-201ENSMUST00000161709 616 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm15812-201ENSMUST00000162331 748 ntBASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rrp8Q9DB85 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 226.5 ms