Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RtcbQ99LF4 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.71□□□□□ -1.17
RtcbQ99LF4 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.71□□□□□ -1.17
RtcbQ99LF4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
RtcbQ99LF4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RtcbQ99LF4 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
RtcbQ99LF4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm13484-201ENSMUST00000120738 412 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm13533-201ENSMUST00000121104 177 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm12936-201ENSMUST00000121439 301 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm13440-201ENSMUST00000121665 496 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm23280-201ENSMUST00000157905 139 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm24216-201ENSMUST00000158259 117 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm24363-201ENSMUST00000158440 311 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm18128-201ENSMUST00000172625 511 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Mrgpra14-201ENSMUST00000189782 913 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm38334-201ENSMUST00000195060 313 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm42814-201ENSMUST00000199370 460 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm43578-201ENSMUST00000201250 459 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 AC153541.1-201ENSMUST00000213786 294 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 CT485612.3-201ENSMUST00000222179 408 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 AC150560.3-201ENSMUST00000227442 455 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm24707-201ENSMUST00000082812 107 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.71□□□□□ -1.18
RtcbQ99LF4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RtcbQ99LF4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.7□□□□□ -1.18
RtcbQ99LF4 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.7□□□□□ -1.18
RtcbQ99LF4 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RtcbQ99LF4 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms