Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.84□□□□□ -1.32
Brf1Q8CFK2 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm11561-201ENSMUST00000117429 417 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm11270-201ENSMUST00000117685 471 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm14788-201ENSMUST00000119457 375 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm13341-201ENSMUST00000120780 672 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm24363-201ENSMUST00000158440 311 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm3008-201ENSMUST00000160566 571 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm20561-201ENSMUST00000188131 292 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm17952-201ENSMUST00000193914 747 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm19880-201ENSMUST00000207731 318 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm18039-201ENSMUST00000217816 728 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm19116-201ENSMUST00000218592 642 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm2099-201ENSMUST00000220979 412 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Diaph3-206ENSMUST00000226745 713 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brf1Q8CFK2 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm25660-201ENSMUST00000158470 104 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm37203-201ENSMUST00000191618 385 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm37235-201ENSMUST00000195171 59 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm45269-201ENSMUST00000210359 282 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm10709-201ENSMUST00000213318 480 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm6195-201ENSMUST00000063059 357 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Gm16335-201ENSMUST00000077495 309 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Brf1Q8CFK2 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Brf1Q8CFK2 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms