Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm37106-201ENSMUST00000193760 1532 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm15670-201ENSMUST00000117740 447 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm26153-201ENSMUST00000157433 127 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm16285-201ENSMUST00000162999 347 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm2622-201ENSMUST00000200018 471 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Mir194-1-201ENSMUST00000083647 67 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm42975-201ENSMUST00000200612 1491 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm15950-201ENSMUST00000162902 1973 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm8878-201ENSMUST00000173552 1725 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm11227-201ENSMUST00000119774 471 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm11910-201ENSMUST00000121624 432 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Mir1947-201ENSMUST00000158235 85 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm26167-201ENSMUST00000158423 253 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm26925-201ENSMUST00000182470 957 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC4.87□□□□□ -1.63
Col6a6Q8C6K9 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm5511-201ENSMUST00000189380 802 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm18791-201ENSMUST00000204611 726 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm22220-201ENSMUST00000082671 149 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm14367-201ENSMUST00000119214 1497 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm37076-201ENSMUST00000192033 2294 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 AC121870.1-201ENSMUST00000216279 4879 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm11633-201ENSMUST00000118176 444 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm14125-202ENSMUST00000120921 756 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms