Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm8192-201ENSMUST00000182196 958 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm27313-201ENSMUST00000183500 142 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm44373-201ENSMUST00000196112 169 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm44896-201ENSMUST00000206190 772 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 AC134334.1-201ENSMUST00000214277 255 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 CT025680.1-201ENSMUST00000217375 375 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm25141-201ENSMUST00000083177 107 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Mir106b-201ENSMUST00000083580 82 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm11501-201ENSMUST00000118039 581 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm12713-201ENSMUST00000118404 764 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm12876-201ENSMUST00000120975 408 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm27957-201ENSMUST00000184054 127 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm8524-201ENSMUST00000186232 379 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm28117-201ENSMUST00000188472 371 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm45232-201ENSMUST00000207811 162 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm44852-201ENSMUST00000207950 369 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm45739-201ENSMUST00000213094 388 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm24490-201ENSMUST00000083803 98 ntBASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms