Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm14777-201ENSMUST00000116306 176 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm14756-201ENSMUST00000116395 240 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm6893-201ENSMUST00000118385 522 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm16100-201ENSMUST00000120489 231 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm15158-201ENSMUST00000120577 570 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm22960-201ENSMUST00000122517 104 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm15905-201ENSMUST00000137042 298 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Fam229b-207ENSMUST00000137132 663 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm27410-201ENSMUST00000183851 115 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm8976-201ENSMUST00000187136 703 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm28785-201ENSMUST00000187478 379 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm3745-201ENSMUST00000193773 421 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm43945-201ENSMUST00000203595 754 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm39121-201ENSMUST00000208847 525 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm45795-201ENSMUST00000211847 400 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 AC140477.1-201ENSMUST00000222354 246 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm44874-201ENSMUST00000206586 1542 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm15925-201ENSMUST00000120641 1881 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Tmem87a-202ENSMUST00000090046 2897 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim35Q8C006 A230059L01Rik-201ENSMUST00000126596 2813 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Kcns3-203ENSMUST00000217974 2314 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 AC124569.3-201ENSMUST00000224860 1621 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Apoc2-202ENSMUST00000134116 569 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trim35Q8C006 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm15864-201ENSMUST00000145950 369 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm4202-201ENSMUST00000169025 733 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm18848-201ENSMUST00000182069 792 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim35Q8C006 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim35Q8C006 AC122924.2-201ENSMUST00000220799 298 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm33654-201ENSMUST00000221704 215 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Mbl2-201ENSMUST00000025797 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Mylpf-201ENSMUST00000032910 766 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm25792-201ENSMUST00000083289 100 ntBASIC8.56□□□□□ -1.04
Trim35Q8C006 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Clmn-202ENSMUST00000109937 3529 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim35Q8C006 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim35Q8C006 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Trim35Q8C006 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms