Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm43606-201ENSMUST00000195938 3556 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm14981-201ENSMUST00000117325 943 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm15001-201ENSMUST00000117657 795 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm11848-201ENSMUST00000121207 973 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm11385-201ENSMUST00000121513 570 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm22390-201ENSMUST00000157588 325 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm25906-201ENSMUST00000158489 126 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm9597-201ENSMUST00000171913 602 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm27018-201ENSMUST00000181136 225 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm7634-201ENSMUST00000185778 553 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm8009-201ENSMUST00000191672 436 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm38281-201ENSMUST00000192301 315 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm37322-201ENSMUST00000193409 337 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm37288-201ENSMUST00000193963 334 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm43007-201ENSMUST00000197618 291 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm18592-201ENSMUST00000221529 276 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.58□□□□□ -1.52
Col8a1Q00780 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms