Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox3P53784 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sox3P53784 Mir290a-201ENSMUST00000104627 83 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Gm11990-201ENSMUST00000121505 897 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Gm12322-201ENSMUST00000121605 389 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Gm5946-201ENSMUST00000182340 970 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Mir6539-201ENSMUST00000183732 110 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.35□□□□□ -1.55
Sox3P53784 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.35□□□□□ -1.55
Sox3P53784 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.35□□□□□ -1.55
Sox3P53784 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Mir31-201ENSMUST00000083474 106 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Sox3P53784 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.35□□□□□ -1.55
Sox3P53784 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.34□□□□□ -1.55
Sox3P53784 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm13473-201ENSMUST00000119289 367 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.34□□□□□ -1.55
Sox3P53784 Gm22993-201ENSMUST00000175423 254 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm27037-201ENSMUST00000182270 960 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm27543-201ENSMUST00000183562 177 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm27468-201ENSMUST00000183577 106 ntBASIC5.34□□□□□ -1.55
Sox3P53784 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Gm37774-201ENSMUST00000194401 245 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm44494-201ENSMUST00000196760 129 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm44316-201ENSMUST00000199274 97 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm44048-201ENSMUST00000204531 361 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.34□□□□□ -1.55
Sox3P53784 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.34□□□□□ -1.55
Sox3P53784 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.34□□□□□ -1.55
Sox3P53784 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Thoc7-209ENSMUST00000225325 765 ntBASIC5.34□□□□□ -1.55
Sox3P53784 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.34□□□□□ -1.55
Sox3P53784 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.34□□□□□ -1.55
Sox3P53784 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.34□□□□□ -1.55
Sox3P53784 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sox3P53784 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Sox3P53784 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Sox3P53784 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.34□□□□□ -1.55
Sox3P53784 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sox3P53784 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.34□□□□□ -1.56
Sox3P53784 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox3P53784 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox3P53784 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox3P53784 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox3P53784 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.34□□□□□ -1.56
Sox3P53784 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.33□□□□□ -1.56
Sox3P53784 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox3P53784 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox3P53784 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox3P53784 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox3P53784 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sox3P53784 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.33□□□□□ -1.56
Sox3P53784 Gm13311-201ENSMUST00000117863 379 ntBASIC5.33□□□□□ -1.56
Sox3P53784 Gm13024-201ENSMUST00000121756 718 ntBASIC5.33□□□□□ -1.56
Sox3P53784 Gm23631-201ENSMUST00000175291 123 ntBASIC5.33□□□□□ -1.56
Sox3P53784 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms