Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox1P53783 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.79□□□□□ -1.32
Sox1P53783 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.79□□□□□ -1.32
Sox1P53783 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox1P53783 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Sox1P53783 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Mir1188-201ENSMUST00000116756 120 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox1P53783 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm2892-201ENSMUST00000145537 711 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox1P53783 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox1P53783 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm20648-201ENSMUST00000175815 328 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm28560-201ENSMUST00000186091 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm28334-201ENSMUST00000186653 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm28495-201ENSMUST00000188452 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm28232-201ENSMUST00000188683 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm28481-201ENSMUST00000189231 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm29059-201ENSMUST00000191534 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm37765-201ENSMUST00000192395 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm37237-201ENSMUST00000192893 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm36968-201ENSMUST00000193737 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm38290-201ENSMUST00000195238 315 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm4332-201ENSMUST00000196114 346 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm42580-201ENSMUST00000197223 753 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm43171-201ENSMUST00000199882 291 ntBASIC6.78□□□□□ -1.32
Sox1P53783 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm44281-201ENSMUST00000203090 166 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm18007-201ENSMUST00000205019 844 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm45034-201ENSMUST00000206831 482 ntBASIC6.78□□□□□ -1.32
Sox1P53783 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.78□□□□□ -1.32
Sox1P53783 Gm17988-201ENSMUST00000208796 535 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm18850-201ENSMUST00000211578 388 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
Sox1P53783 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.78□□□□□ -1.32
Sox1P53783 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.78□□□□□ -1.32
Sox1P53783 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox1P53783 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox1P53783 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox1P53783 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC6.77□□□□□ -1.32
Sox1P53783 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.77□□□□□ -1.32
Sox1P53783 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.77□□□□□ -1.32
Sox1P53783 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Sox1P53783 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox1P53783 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox1P53783 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.77□□□□□ -1.33
Sox1P53783 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox1P53783 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Sox1P53783 Gm20486-201ENSMUST00000101544 128 ntBASIC6.77□□□□□ -1.33
Sox1P53783 Gm22591-201ENSMUST00000104243 106 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms