Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm23692-201ENSMUST00000101881 160 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm14874-201ENSMUST00000118995 438 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.69□□□□□ -1.5
Cxcl12P40224 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm25962-201ENSMUST00000157173 168 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm26486-201ENSMUST00000158021 110 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm27875-201ENSMUST00000184425 123 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Mir6899-201ENSMUST00000184798 64 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm37716-201ENSMUST00000193553 947 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm18150-201ENSMUST00000195341 645 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm18427-201ENSMUST00000195422 515 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm29781-201ENSMUST00000203862 478 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.69□□□□□ -1.5
Cxcl12P40224 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm22826-201ENSMUST00000083774 165 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.69□□□□□ -1.5
Cxcl12P40224 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cxcl12P40224 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cxcl12P40224 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm25418-201ENSMUST00000104214 129 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm12073-201ENSMUST00000117382 524 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm14620-201ENSMUST00000120656 383 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm12466-201ENSMUST00000121199 620 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm6081-201ENSMUST00000134472 489 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm19898-201ENSMUST00000177490 251 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm29736-201ENSMUST00000198189 385 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm42643-201ENSMUST00000200504 279 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm9038-201ENSMUST00000203400 604 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cxcl12P40224 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.68□□□□□ -1.5
Cxcl12P40224 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.67□□□□□ -1.5
Cxcl12P40224 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cxcl12P40224 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cxcl12P40224 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms