Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.84□□□□□ -1.47
Mmp3P28862 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Mmp3P28862 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Mmp3P28862 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Mmp3P28862 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Mmp3P28862 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Mmp3P28862 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Mmp3P28862 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Mmp3P28862 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Mmp3P28862 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Mmp3P28862 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.84□□□□□ -1.48
Mmp3P28862 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.84□□□□□ -1.48
Mmp3P28862 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Mmp3P28862 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.84□□□□□ -1.48
Mmp3P28862 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Mmp3P28862 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Mmp3P28862 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm11833-201ENSMUST00000118393 853 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm26238-201ENSMUST00000175538 117 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Gm10784-201ENSMUST00000178715 238 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Gm27543-201ENSMUST00000183562 177 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.83□□□□□ -1.48
Mmp3P28862 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Mir409-201ENSMUST00000198153 79 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm45359-201ENSMUST00000210635 427 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Mmp3P28862 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm23514-201ENSMUST00000082827 130 ntBASIC5.83□□□□□ -1.48
Mmp3P28862 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Mmp3P28862 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Mmp3P28862 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Mmp3P28862 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Mmp3P28862 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Mmp3P28862 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Mmp3P28862 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Mmp3P28862 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm11679-201ENSMUST00000121830 779 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm23537-201ENSMUST00000157536 330 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm23546-201ENSMUST00000158211 137 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm16112-201ENSMUST00000159075 382 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm45574-201ENSMUST00000210921 331 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm45870-201ENSMUST00000211269 601 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Gm21041-201ENSMUST00000214829 823 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Mmp3P28862 Gm23508-201ENSMUST00000083079 72 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Mir134-201ENSMUST00000083492 71 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Mmp3P28862 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.82□□□□□ -1.48
Mmp3P28862 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Mmp3P28862 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Mmp3P28862 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Mmp3P28862 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Mmp3P28862 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms