Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25227-201ENSMUST00000158204 112 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm24175-201ENSMUST00000158931 129 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm17711-201ENSMUST00000172028 237 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm8609-201ENSMUST00000182967 998 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm4785-201ENSMUST00000191025 751 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm36638-201ENSMUST00000193295 400 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm18553-201ENSMUST00000194152 634 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm43063-201ENSMUST00000198198 1081 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm44604-201ENSMUST00000205475 496 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm19880-201ENSMUST00000207731 318 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm17999-201ENSMUST00000211568 542 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm20786-201ENSMUST00000212649 436 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 CU062626.1-201ENSMUST00000225248 505 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 n-R5s156-201ENSMUST00000083377 105 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc1P18828 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm5454-201ENSMUST00000052030 1453 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Sdc1P18828 Gm5512-201ENSMUST00000218013 1353 ntBASIC4.4□□□□□ -1.7
Sdc1P18828 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.4□□□□□ -1.7
Sdc1P18828 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sdc1P18828 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Sdc1P18828 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc1P18828 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm23979-201ENSMUST00000104071 128 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm24235-201ENSMUST00000104319 129 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc1P18828 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm8129-201ENSMUST00000118230 213 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm12174-201ENSMUST00000119853 813 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC4.4□□□□□ -1.71
Sdc1P18828 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm26162-201ENSMUST00000157793 132 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Mir1981-201ENSMUST00000157934 82 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm22857-201ENSMUST00000174969 134 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm27636-201ENSMUST00000184528 122 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm18700-201ENSMUST00000185791 553 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm42694-201ENSMUST00000196951 358 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm43315-201ENSMUST00000198120 313 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm44820-201ENSMUST00000207420 396 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc1P18828 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc1P18828 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 AC154417.1-201ENSMUST00000223876 476 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 AC131710.2-201ENSMUST00000226773 683 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Glycam1-204ENSMUST00000228895 641 ntBASIC4.4□□□□□ -1.71
Sdc1P18828 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc1P18828 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc1P18828 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms