Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lire1P11260 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lire1P11260 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Gm11976-201ENSMUST00000119236 295 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm13118-201ENSMUST00000120402 549 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm15194-201ENSMUST00000120453 434 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Gm24719-201ENSMUST00000157520 110 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lire1P11260 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lire1P11260 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm8032-201ENSMUST00000171009 574 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Mir3097-201ENSMUST00000175356 67 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm20778-201ENSMUST00000178524 627 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Mir6367-201ENSMUST00000183385 102 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm27976-201ENSMUST00000183635 162 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Mir6361-201ENSMUST00000185079 101 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm29160-201ENSMUST00000190094 699 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm37072-201ENSMUST00000194570 837 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.64□□□□□ -1.51
Lire1P11260 Nsa2-203ENSMUST00000225410 974 ntBASIC5.64□□□□□ -1.51
Lire1P11260 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.64□□□□□ -1.51
Lire1P11260 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.64□□□□□ -1.51
Lire1P11260 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Gm17165-201ENSMUST00000096155 493 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Lire1P11260 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Lire1P11260 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.64□□□□□ -1.51
Lire1P11260 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Lire1P11260 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lire1P11260 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm25917-201ENSMUST00000104267 130 ntBASIC5.63□□□□□ -1.51
Lire1P11260 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Gm8475-201ENSMUST00000118211 526 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm13455-201ENSMUST00000118767 517 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm14938-201ENSMUST00000119482 943 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm16511-201ENSMUST00000120019 564 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm7212-201ENSMUST00000120817 348 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm13162-201ENSMUST00000121481 454 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm14695-201ENSMUST00000121721 282 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm25806-201ENSMUST00000122782 122 ntBASIC5.63□□□□□ -1.51
Lire1P11260 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lire1P11260 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm20401-201ENSMUST00000173717 212 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm15257-201ENSMUST00000177680 883 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm15252-201ENSMUST00000177750 883 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm15256-201ENSMUST00000177793 883 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm15260-201ENSMUST00000179402 883 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm8506-201ENSMUST00000186661 829 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm29610-201ENSMUST00000187749 453 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm29489-201ENSMUST00000188934 324 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm43925-201ENSMUST00000203498 206 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm2225-201ENSMUST00000209570 377 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.63□□□□□ -1.51
Lire1P11260 Gm7780-201ENSMUST00000214787 406 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.63□□□□□ -1.51
Lire1P11260 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.63□□□□□ -1.51
Lire1P11260 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.63□□□□□ -1.51
Lire1P11260 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.63□□□□□ -1.51
Lire1P11260 Gm6068-201ENSMUST00000222270 387 ntBASIC5.63□□□□□ -1.51
Lire1P11260 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.63□□□□□ -1.51
Lire1P11260 AV026068-231ENSMUST00000225862 482 ntBASIC5.63□□□□□ -1.51
Lire1P11260 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms