Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Srp54bE9PXC0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm13887-201ENSMUST00000119009 344 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm6620-201ENSMUST00000120113 715 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm22106-201ENSMUST00000122544 127 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm20453-201ENSMUST00000173968 226 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Mir6539-201ENSMUST00000183732 110 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm27225-201ENSMUST00000183833 557 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm18969-201ENSMUST00000189423 730 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm29736-201ENSMUST00000198189 385 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm2961-201ENSMUST00000211074 772 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.6□□□□□ -1.51
Srp54bE9PXC0 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Srp54bE9PXC0 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm15741-201ENSMUST00000119401 754 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm4234-201ENSMUST00000119747 714 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm11804-201ENSMUST00000121663 468 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm11200-201ENSMUST00000121698 448 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm26069-201ENSMUST00000157497 277 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm3216-201ENSMUST00000166927 486 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm3141-201ENSMUST00000168726 499 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm8032-201ENSMUST00000171009 574 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Trbv27-201ENSMUST00000193711 277 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm18427-201ENSMUST00000195422 515 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm44683-201ENSMUST00000209088 484 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm18587-201ENSMUST00000213736 841 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Gm19174-201ENSMUST00000216944 956 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Srp54bE9PXC0 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms