Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a3E9PWQ3 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm5405-201ENSMUST00000120478 609 ntBASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Mir7578-201ENSMUST00000183455 82 ntBASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm8023-201ENSMUST00000195298 903 ntBASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.21□□□□□ -1.57
Col6a3E9PWQ3 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm13593-201ENSMUST00000121329 692 ntBASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm45528-201ENSMUST00000209854 3145 ntBASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm14750-201ENSMUST00000118262 516 ntBASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col6a3E9PWQ3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm8202-201ENSMUST00000117682 310 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm14755-201ENSMUST00000118037 384 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm5842-201ENSMUST00000195073 622 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm6647-201ENSMUST00000170514 641 ntBASIC5.2□□□□□ -1.58
Col6a3E9PWQ3 Gm37838-201ENSMUST00000194464 312 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms