Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sf3a3Q9D554 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sf3a3Q9D554 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm24869-201ENSMUST00000104072 128 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm16073-201ENSMUST00000116032 517 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm11517-201ENSMUST00000119491 387 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm7613-201ENSMUST00000139070 487 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm16563-201ENSMUST00000162673 423 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm5277-201ENSMUST00000164923 556 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm20454-201ENSMUST00000172713 221 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm38181-201ENSMUST00000181357 720 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm17952-201ENSMUST00000193914 747 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm45448-201ENSMUST00000211739 209 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm4057-201ENSMUST00000221407 368 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sf3a3Q9D554 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Mir449c-201ENSMUST00000102192 109 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm25785-201ENSMUST00000104129 125 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm6884-201ENSMUST00000119318 615 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm6987-201ENSMUST00000119319 428 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm12577-201ENSMUST00000119701 574 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm13998-201ENSMUST00000120952 335 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm11446-201ENSMUST00000121319 866 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm9294-201ENSMUST00000165198 789 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm18444-201ENSMUST00000191239 629 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm37533-201ENSMUST00000193848 545 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm3544-201ENSMUST00000196129 305 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm43774-201ENSMUST00000196327 878 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm44163-201ENSMUST00000205140 475 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm7443-201ENSMUST00000206355 378 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 AL772397.1-201ENSMUST00000216707 606 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm32526-201ENSMUST00000221878 981 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm11360-201ENSMUST00000221898 262 ntBASIC5.62□□□□□ -1.51
Sf3a3Q9D554 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms