Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm5087-204ENSMUST00000225820 645 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm12131-201ENSMUST00000117479 359 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm23883-201ENSMUST00000122686 290 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm24477-201ENSMUST00000157438 103 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Mir6412-201ENSMUST00000184477 97 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm27781-201ENSMUST00000185185 92 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm8672-201ENSMUST00000221200 332 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Olfr192-201ENSMUST00000080251 925 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lsm1Q8VC85 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm14106-201ENSMUST00000119382 438 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm14831-201ENSMUST00000120253 409 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm25117-201ENSMUST00000157194 144 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm23896-201ENSMUST00000158109 130 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm16125-201ENSMUST00000159003 339 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm10410-201ENSMUST00000180138 384 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm26898-201ENSMUST00000181678 384 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm8993-201ENSMUST00000182182 983 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm8183-201ENSMUST00000183134 980 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Mir7222-201ENSMUST00000183740 75 ntBASIC5.29□□□□□ -1.56
Lsm1Q8VC85 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.29□□□□□ -1.56
Lsm1Q8VC85 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms