Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.56□□□□□ -1.52
Vps39Q8R5L3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.56□□□□□ -1.52
Vps39Q8R5L3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm22374-201ENSMUST00000104583 132 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm11699-201ENSMUST00000119016 401 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm14805-201ENSMUST00000120172 340 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm6175-201ENSMUST00000121351 400 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm14237-201ENSMUST00000122080 430 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm2058-201ENSMUST00000178791 560 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm27148-201ENSMUST00000185086 160 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm38122-201ENSMUST00000192679 885 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm37336-202ENSMUST00000193705 468 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Mir375-201ENSMUST00000083682 64 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Olfr519-201ENSMUST00000084752 960 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.55□□□□□ -1.52
Vps39Q8R5L3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Vps39Q8R5L3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm24709-201ENSMUST00000104123 132 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm8761-201ENSMUST00000121507 955 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm27679-201ENSMUST00000184612 84 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Mir6952-201ENSMUST00000185092 61 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm29745-201ENSMUST00000198005 687 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Gm8137-201ENSMUST00000218997 463 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps39Q8R5L3 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.54□□□□□ -1.52
Vps39Q8R5L3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms