Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm25415-201ENSMUST00000104220 132 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm24069-201ENSMUST00000104512 127 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm13640-201ENSMUST00000118445 264 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm14054-201ENSMUST00000120744 704 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm12451-201ENSMUST00000121636 633 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm15877-201ENSMUST00000121897 964 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm16139-201ENSMUST00000160015 420 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm27225-201ENSMUST00000183833 557 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm29263-201ENSMUST00000188718 463 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43744-201ENSMUST00000196387 688 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43157-201ENSMUST00000198223 412 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43198-201ENSMUST00000200927 326 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm7492-201ENSMUST00000201745 725 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 BC049739-201ENSMUST00000202626 660 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43929-201ENSMUST00000203025 409 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm44538-201ENSMUST00000205615 348 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm18645-201ENSMUST00000209593 651 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clrn1Q8K445 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm15185-201ENSMUST00000117397 746 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm15659-201ENSMUST00000118881 341 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm11925-201ENSMUST00000121375 535 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm12639-201ENSMUST00000121400 493 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm12706-201ENSMUST00000121588 698 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm13642-201ENSMUST00000121697 381 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm16411-201ENSMUST00000122164 1100 ntBASIC5.82□□□□□ -1.48
Clrn1Q8K445 Gm12317-201ENSMUST00000122307 319 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms