Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm29785-201ENSMUST00000217033 383 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Gm23626-201ENSMUST00000082458 133 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a6Q8C6K9 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm37593-201ENSMUST00000191669 3254 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm8256-201ENSMUST00000169178 453 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Mir7012-201ENSMUST00000183900 64 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm31306-201ENSMUST00000197517 508 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm7721-201ENSMUST00000200446 546 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm4290-201ENSMUST00000206897 814 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm18924-201ENSMUST00000211929 316 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm46191-201ENSMUST00000218899 433 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Gm42992-201ENSMUST00000197043 6836 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 AC139350.2-201ENSMUST00000226508 2331 ntBASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm20768-201ENSMUST00000199527 2338 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm23839-201ENSMUST00000116957 109 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm11925-201ENSMUST00000121375 535 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm26069-201ENSMUST00000157497 277 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm6872-201ENSMUST00000165001 700 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm27690-201ENSMUST00000184596 126 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm27148-201ENSMUST00000185086 160 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm9038-201ENSMUST00000203400 604 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm44580-201ENSMUST00000206333 877 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm23972-201ENSMUST00000083322 165 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm37078-201ENSMUST00000193314 2009 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm24117-201ENSMUST00000103973 133 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm15238-201ENSMUST00000119938 1296 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm23631-201ENSMUST00000175291 123 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm37716-201ENSMUST00000193553 947 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm46327-201ENSMUST00000218240 365 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Smc5-206ENSMUST00000226111 3265 ntBASIC4.89□□□□□ -1.63
Col6a6Q8C6K9 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm36947-201ENSMUST00000194709 2249 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Mir1945-201ENSMUST00000157919 78 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.88□□□□□ -1.63
Col6a6Q8C6K9 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms