Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Gm44224-201ENSMUST00000204131 1463 ntBASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Trim47Q8C0E3 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm25316-201ENSMUST00000116826 118 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm14794-201ENSMUST00000118181 192 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm6987-201ENSMUST00000119319 428 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm15193-201ENSMUST00000120224 865 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm11553-201ENSMUST00000120682 240 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm23276-201ENSMUST00000157913 138 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm26271-201ENSMUST00000158349 104 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm22675-201ENSMUST00000158430 104 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm24363-201ENSMUST00000158440 311 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm24969-201ENSMUST00000180331 79 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm10136-201ENSMUST00000183196 435 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm27522-201ENSMUST00000183949 230 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm37689-201ENSMUST00000193139 275 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm6702-201ENSMUST00000208496 471 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm6929-201ENSMUST00000210930 468 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm18704-201ENSMUST00000219736 446 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 AC126554.4-201ENSMUST00000221055 409 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm26130-201ENSMUST00000083171 138 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm37096-201ENSMUST00000192317 2058 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.61□□□□□ -1.19
Trim47Q8C0E3 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim47Q8C0E3 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm14229-201ENSMUST00000121178 850 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm12778-201ENSMUST00000122341 333 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm23205-201ENSMUST00000158671 103 ntBASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim47Q8C0E3 Mir5617-201ENSMUST00000176786 57 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms