Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.56□□□□□ -1.52
Trub1Q8C0D0 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm13245-201ENSMUST00000119646 260 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm26489-201ENSMUST00000157880 264 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm17907-201ENSMUST00000173150 710 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm6055-201ENSMUST00000180532 378 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm27037-201ENSMUST00000182270 960 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm44412-201ENSMUST00000203018 294 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm8039-201ENSMUST00000204758 712 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm18789-201ENSMUST00000216115 550 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm22456-201ENSMUST00000082578 125 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.55□□□□□ -1.52
Trub1Q8C0D0 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm15152-201ENSMUST00000121540 394 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm23539-201ENSMUST00000157537 224 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm26172-201ENSMUST00000158421 134 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm10087-201ENSMUST00000167650 330 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 LOC665443-201ENSMUST00000212284 796 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Mir331-201ENSMUST00000083673 96 ntBASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trub1Q8C0D0 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm24235-201ENSMUST00000104319 129 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm14335-201ENSMUST00000119165 810 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Mir3572-201ENSMUST00000175549 86 ntBASIC5.53□□□□□ -1.52
Trub1Q8C0D0 Gm2914-201ENSMUST00000186120 328 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms