Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm27490-201ENSMUST00000184754 128 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC8.59□□□□□ -1.03
Trim35Q8C006 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Cysrt1-203ENSMUST00000186719 909 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm7424-201ENSMUST00000206919 902 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm4587-201ENSMUST00000209135 637 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Rps7-ps1-201ENSMUST00000211928 391 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 AC160031.1-201ENSMUST00000219914 522 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Dmrtc1a-201ENSMUST00000033686 1247 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Snora61-201ENSMUST00000083015 130 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.59□□□□□ -1.03
Trim35Q8C006 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.59□□□□□ -1.03
Trim35Q8C006 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim35Q8C006 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Trim35Q8C006 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Trim35Q8C006 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm37056-201ENSMUST00000192141 1865 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm24542-201ENSMUST00000103870 110 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Rhox4f-201ENSMUST00000115170 948 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm25599-201ENSMUST00000157816 103 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm16026-205ENSMUST00000162923 641 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm18191-201ENSMUST00000174624 824 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm27406-201ENSMUST00000184881 182 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm18791-201ENSMUST00000204611 726 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm10043-201ENSMUST00000210691 235 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 CT485606.2-201ENSMUST00000216728 401 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm33929-201ENSMUST00000221762 367 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 AC154506.2-201ENSMUST00000225481 1276 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 AC123692.2-201ENSMUST00000226272 342 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm4963-201ENSMUST00000072718 378 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Myo19-201ENSMUST00000020837 1669 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 AC123705.3-201ENSMUST00000223531 2069 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.58□□□□□ -1.04
Trim35Q8C006 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim35Q8C006 Gm43781-201ENSMUST00000197634 2681 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Pld1-203ENSMUST00000123539 3732 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 E230016K23Rik-201ENSMUST00000125626 2139 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm37222-201ENSMUST00000192806 2961 ntBASIC8.57□□□□□ -1.04
Trim35Q8C006 Robo2-201ENSMUST00000116586 4764 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim35Q8C006 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim35Q8C006 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms