Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.13□□□□□ -1.27
Col16a1Q8BLX7 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm24628-201ENSMUST00000122761 289 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm23993-201ENSMUST00000157478 144 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm25348-201ENSMUST00000158961 111 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 AC154640.4-201ENSMUST00000226647 4640 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm3531-201ENSMUST00000162698 489 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Mir6410-201ENSMUST00000184204 104 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 AC158955.1-201ENSMUST00000227140 385 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm22456-201ENSMUST00000082578 125 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm23796-201ENSMUST00000084011 160 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Gm15170-201ENSMUST00000121593 2023 ntBASIC7.12□□□□□ -1.27
Col16a1Q8BLX7 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 AC152944.1-201ENSMUST00000220160 3101 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Gm4714-201ENSMUST00000203395 279 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Gm45008-201ENSMUST00000206420 493 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Gm6906-201ENSMUST00000218014 569 ntBASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Col16a1Q8BLX7 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm18259-201ENSMUST00000220991 2010 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm11679-201ENSMUST00000121830 779 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm26153-201ENSMUST00000157433 127 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm29592-201ENSMUST00000189434 370 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Mir6516-201ENSMUST00000196236 110 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm44074-201ENSMUST00000204562 337 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Gm19552-201ENSMUST00000194744 2833 ntBASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col16a1Q8BLX7 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col16a1Q8BLX7 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 200.6 ms