Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm11484-201ENSMUST00000119808 338 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm11553-201ENSMUST00000120682 240 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm23591-201ENSMUST00000157663 286 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm25435-201ENSMUST00000158277 267 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm16102-201ENSMUST00000160955 420 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm8358-201ENSMUST00000167222 555 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm27299-201ENSMUST00000184593 103 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm21654-201ENSMUST00000188086 691 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm37193-201ENSMUST00000193087 513 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm43048-201ENSMUST00000196101 388 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm2142-201ENSMUST00000197899 589 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm7948-201ENSMUST00000212607 844 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm18704-201ENSMUST00000219736 446 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh19Q80TF3 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm15175-201ENSMUST00000117629 132 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm12268-201ENSMUST00000118398 442 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm11533-201ENSMUST00000120287 477 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm15187-201ENSMUST00000122329 264 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm17060-201ENSMUST00000172394 824 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm23810-201ENSMUST00000175150 74 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm27152-201ENSMUST00000183828 99 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm27919-201ENSMUST00000185163 107 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm35323-201ENSMUST00000191836 499 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm38122-201ENSMUST00000192679 885 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm42708-201ENSMUST00000196332 905 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm19457-201ENSMUST00000200995 448 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm21041-201ENSMUST00000214829 823 ntBASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh19Q80TF3 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms