Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44055-201ENSMUST00000204376 247 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm36247-201ENSMUST00000211834 285 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Gm19256-201ENSMUST00000218550 231 ntBASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim41Q5NCC3 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Gm45084-201ENSMUST00000207096 1957 ntBASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Gm13340-201ENSMUST00000117219 1545 ntBASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trim41Q5NCC3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 AC125409.2-201ENSMUST00000221888 2158 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm45477-201ENSMUST00000200213 5498 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm37138-201ENSMUST00000194564 2089 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Mir466n-201ENSMUST00000104798 94 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm5381-201ENSMUST00000117975 1250 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm11256-201ENSMUST00000118109 829 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm11848-201ENSMUST00000121207 973 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm9785-202ENSMUST00000144563 593 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm23269-201ENSMUST00000178701 107 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm6077-201ENSMUST00000196008 499 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm44990-201ENSMUST00000203922 217 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm8264-201ENSMUST00000217801 465 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm4510-201ENSMUST00000218265 427 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 AC113031.5-201ENSMUST00000227116 606 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 AC156016.5-201ENSMUST00000228742 355 ntBASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim41Q5NCC3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm44763-201ENSMUST00000208287 2019 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm3883-201ENSMUST00000098119 3229 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm37151-201ENSMUST00000194631 5007 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm13301-201ENSMUST00000121728 2446 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm22488-201ENSMUST00000116811 127 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm14515-201ENSMUST00000121327 216 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm12005-201ENSMUST00000121451 379 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm18522-201ENSMUST00000173947 650 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm22242-201ENSMUST00000175224 118 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm18752-201ENSMUST00000192876 608 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm37523-201ENSMUST00000194901 412 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm43054-201ENSMUST00000199495 884 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm44465-201ENSMUST00000199536 114 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm44952-201ENSMUST00000204443 433 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm29818-201ENSMUST00000218070 165 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 AC152946.2-201ENSMUST00000219071 337 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 AC141642.1-201ENSMUST00000220598 229 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm9315-201ENSMUST00000222696 908 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 AC164618.3-201ENSMUST00000224863 681 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm25793-201ENSMUST00000083287 107 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm25004-201ENSMUST00000083811 161 ntBASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim41Q5NCC3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms