Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Gm14659-201ENSMUST00000117667 843 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm11550-201ENSMUST00000118210 699 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm15044-201ENSMUST00000120703 598 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox3P53784 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm24860-201ENSMUST00000158457 276 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm24767-201ENSMUST00000158509 95 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm28507-201ENSMUST00000189737 703 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm19124-201ENSMUST00000191041 832 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm4322-201ENSMUST00000191094 336 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm6543-201ENSMUST00000197353 808 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm6702-201ENSMUST00000208496 471 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm45660-201ENSMUST00000210267 151 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm46369-201ENSMUST00000221577 401 ntBASIC5.37□□□□□ -1.55
Sox3P53784 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.37□□□□□ -1.55
Sox3P53784 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sox3P53784 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Gm25187-201ENSMUST00000083906 133 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox3P53784 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.37□□□□□ -1.55
Sox3P53784 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox3P53784 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Sox3P53784 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Sox3P53784 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Gm14842-201ENSMUST00000119577 269 ntBASIC5.36□□□□□ -1.55
Sox3P53784 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Gm8185-201ENSMUST00000160999 669 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm25942-201ENSMUST00000180080 110 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm21139-201ENSMUST00000186594 877 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Gm28567-201ENSMUST00000190270 693 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Gm37631-201ENSMUST00000192275 364 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm37044-201ENSMUST00000193531 693 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm38369-201ENSMUST00000195101 693 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm44132-201ENSMUST00000205142 151 ntBASIC5.36□□□□□ -1.55
Sox3P53784 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Gm18329-201ENSMUST00000215832 589 ntBASIC5.36□□□□□ -1.55
Sox3P53784 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.36□□□□□ -1.55
Sox3P53784 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Zfp429-203ENSMUST00000224684 524 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Sox3P53784 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sox3P53784 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Sox3P53784 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.36□□□□□ -1.55
Sox3P53784 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.36□□□□□ -1.55
Sox3P53784 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.36□□□□□ -1.55
Sox3P53784 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sox3P53784 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sox3P53784 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.35□□□□□ -1.55
Sox3P53784 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sox3P53784 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 284.3 ms