Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm14485-201ENSMUST00000119489 493 ntBASIC8.34□□□□□ -1.08
Cux1P53564 Gm23993-201ENSMUST00000157478 144 ntBASIC8.34□□□□□ -1.08
Cux1P53564 Gm22725-201ENSMUST00000158092 110 ntBASIC8.34□□□□□ -1.08
Cux1P53564 Gm8941-201ENSMUST00000181451 899 ntBASIC8.34□□□□□ -1.08
Cux1P53564 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Cux1P53564 AC127279.1-201ENSMUST00000220140 637 ntBASIC8.34□□□□□ -1.08
Cux1P53564 AC164597.1-201ENSMUST00000226538 514 ntBASIC8.34□□□□□ -1.08
Cux1P53564 Gm43360-201ENSMUST00000197656 2887 ntBASIC8.34□□□□□ -1.08
Cux1P53564 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 AC154640.4-201ENSMUST00000226647 4640 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Gm43359-201ENSMUST00000197944 2200 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cux1P53564 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Cux1P53564 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 n-R5s48-201ENSMUST00000122482 110 ntBASIC8.33□□□□□ -1.08
Cux1P53564 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cux1P53564 Mir6516-201ENSMUST00000196236 110 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Gm44074-201ENSMUST00000204562 337 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Gm45008-201ENSMUST00000206420 493 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cux1P53564 Gm38189-201ENSMUST00000194495 1457 ntBASIC8.33□□□□□ -1.08
Cux1P53564 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cux1P53564 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cux1P53564 Gm42503-201ENSMUST00000199080 3706 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cux1P53564 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cux1P53564 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Cux1P53564 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.32□□□□□ -1.08
Cux1P53564 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cux1P53564 Gm11617-201ENSMUST00000119609 639 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm11679-201ENSMUST00000121830 779 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm5834-201ENSMUST00000126680 1026 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC8.32□□□□□ -1.08
Cux1P53564 Gm16345-201ENSMUST00000146065 158 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm24685-201ENSMUST00000157764 285 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm29592-201ENSMUST00000189434 370 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm9238-201ENSMUST00000196181 329 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC8.32□□□□□ -1.08
Cux1P53564 Gm46191-201ENSMUST00000218899 433 ntBASIC8.32□□□□□ -1.08
Cux1P53564 AC160031.1-201ENSMUST00000219914 522 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC8.32□□□□□ -1.08
Cux1P53564 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cux1P53564 Gm42819-201ENSMUST00000199630 5121 ntBASIC8.32□□□□□ -1.08
Cux1P53564 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cux1P53564 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cux1P53564 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cux1P53564 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm22778-201ENSMUST00000104090 128 ntBASIC8.31□□□□□ -1.08
Cux1P53564 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC8.31□□□□□ -1.08
Cux1P53564 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cux1P53564 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC8.31□□□□□ -1.08
Cux1P53564 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC8.31□□□□□ -1.08
Cux1P53564 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Cux1P53564 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cux1P53564 AC151734.1-201ENSMUST00000227023 1740 ntBASIC8.31□□□□□ -1.08
Cux1P53564 AC130827.1-201ENSMUST00000220476 3850 ntBASIC8.31□□□□□ -1.08
Cux1P53564 Gm10652-201ENSMUST00000199790 2622 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm5925-201ENSMUST00000105016 1497 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm7416-201ENSMUST00000117448 1487 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm43788-201ENSMUST00000201539 2417 ntBASIC8.3□□□□□ -1.08
Cux1P53564 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cux1P53564 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cux1P53564 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Cux1P53564 Gm15670-201ENSMUST00000117740 447 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm3267-201ENSMUST00000118671 473 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm24188-201ENSMUST00000157980 108 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Cux1P53564 V1rg10-201ENSMUST00000183378 937 ntBASIC8.3□□□□□ -1.08
Cux1P53564 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC8.3□□□□□ -1.08
Cux1P53564 Gm42663-201ENSMUST00000199883 351 ntBASIC8.3□□□□□ -1.08
Cux1P53564 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cux1P53564 Olfr151-202ENSMUST00000221099 929 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Gm18940-201ENSMUST00000222518 871 ntBASIC8.3□□□□□ -1.08
Cux1P53564 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cux1P53564 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cux1P53564 Gm43027-201ENSMUST00000202906 3691 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms