Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
LtbrP50284 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LtbrP50284 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.39□□□□□ -1.07
LtbrP50284 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LtbrP50284 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm13835-201ENSMUST00000118459 685 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm11902-201ENSMUST00000118849 270 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm15618-201ENSMUST00000121610 452 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm15141-201ENSMUST00000121860 729 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm5924-201ENSMUST00000132554 871 ntBASIC8.39□□□□□ -1.07
LtbrP50284 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm24059-201ENSMUST00000157493 312 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm24729-201ENSMUST00000158225 137 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm25363-201ENSMUST00000158850 245 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm20794-201ENSMUST00000177626 628 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm18667-201ENSMUST00000186523 484 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm37173-201ENSMUST00000194498 1017 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm7285-201ENSMUST00000198801 580 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm43976-201ENSMUST00000203637 235 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm44687-201ENSMUST00000204975 235 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm45279-201ENSMUST00000210315 391 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm45789-201ENSMUST00000213038 364 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC8.39□□□□□ -1.07
LtbrP50284 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC8.39□□□□□ -1.07
LtbrP50284 AC105324.1-201ENSMUST00000227844 386 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Mir106b-201ENSMUST00000083580 82 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm43921-201ENSMUST00000204296 1792 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm9496-201ENSMUST00000191295 1601 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.39□□□□□ -1.07
LtbrP50284 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LtbrP50284 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LtbrP50284 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.39□□□□□ -1.07
LtbrP50284 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.39□□□□□ -1.07
LtbrP50284 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.38□□□□□ -1.07
LtbrP50284 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LtbrP50284 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LtbrP50284 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LtbrP50284 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LtbrP50284 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LtbrP50284 Gm22267-201ENSMUST00000104008 131 ntBASIC8.38□□□□□ -1.07
LtbrP50284 Gm25498-201ENSMUST00000104424 129 ntBASIC8.38□□□□□ -1.07
LtbrP50284 Gm16221-201ENSMUST00000117331 393 ntBASIC8.38□□□□□ -1.07
LtbrP50284 Gm14998-201ENSMUST00000120502 495 ntBASIC8.38□□□□□ -1.07
LtbrP50284 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC8.38□□□□□ -1.07
LtbrP50284 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms