Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm11910-201ENSMUST00000121624 432 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm23228-201ENSMUST00000157296 270 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm15812-201ENSMUST00000162331 748 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Gm7897-201ENSMUST00000193981 554 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm43556-201ENSMUST00000196186 681 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm45845-201ENSMUST00000207326 582 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Gm19170-201ENSMUST00000212440 1084 ntBASIC7.61□□□□□ -1.19
Col18a1P39061 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col18a1P39061 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC7.61□□□□□ -1.19
Col18a1P39061 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Col18a1P39061 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm44829-201ENSMUST00000208008 3193 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col18a1P39061 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Col18a1P39061 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm26143-201ENSMUST00000104480 108 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm15018-201ENSMUST00000117090 633 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm29184-201ENSMUST00000190038 334 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm38291-201ENSMUST00000193671 259 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm36378-201ENSMUST00000201709 388 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm9278-201ENSMUST00000205508 553 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.6□□□□□ -1.19
Col18a1P39061 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC7.6□□□□□ -1.19
Col18a1P39061 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 AC154419.1-201ENSMUST00000227627 272 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col18a1P39061 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Col18a1P39061 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col18a1P39061 Gm38096-201ENSMUST00000193692 2389 ntBASIC7.6□□□□□ -1.19
Col18a1P39061 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col18a1P39061 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm39041-201ENSMUST00000205557 3902 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm3267-201ENSMUST00000118671 473 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm15186-201ENSMUST00000119345 563 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm13213-201ENSMUST00000119668 474 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm24217-201ENSMUST00000158260 133 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm2914-201ENSMUST00000186120 328 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28466-201ENSMUST00000190678 659 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm44585-201ENSMUST00000207150 607 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm19137-201ENSMUST00000213790 1164 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm31931-201ENSMUST00000219666 222 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm7119-201ENSMUST00000221345 695 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm23970-201ENSMUST00000083319 107 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.59□□□□□ -1.19
Col18a1P39061 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col18a1P39061 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms