Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Sdc1P18828 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.43□□□□□ -1.7
Sdc1P18828 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Sdc1P18828 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Sdc1P18828 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Sdc1P18828 AC123629.1-201ENSMUST00000225669 1364 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Sdc1P18828 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm24284-201ENSMUST00000104240 142 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm15772-201ENSMUST00000118533 438 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm12618-201ENSMUST00000121754 483 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Calr-ps-201ENSMUST00000121776 485 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm25669-201ENSMUST00000157699 112 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm7281-201ENSMUST00000160010 543 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Mir5100-201ENSMUST00000174993 64 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Mir6374-201ENSMUST00000184003 107 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm27596-201ENSMUST00000185061 83 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm38068-201ENSMUST00000192546 540 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm4860-201ENSMUST00000200368 454 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm7042-201ENSMUST00000223027 384 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 AC113198.1-201ENSMUST00000226353 832 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 AC154757.2-201ENSMUST00000228885 743 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm5830-201ENSMUST00000049117 443 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Sdc1P18828 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Sdc1P18828 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Sdc1P18828 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc1P18828 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Sdc1P18828 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.42□□□□□ -1.7
Sdc1P18828 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc1P18828 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm25083-201ENSMUST00000102319 92 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm8250-201ENSMUST00000117398 774 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm3931-201ENSMUST00000119038 455 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Apc-ps1-201ENSMUST00000119356 470 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm7079-201ENSMUST00000119726 171 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm16420-201ENSMUST00000120258 856 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm13484-201ENSMUST00000120738 412 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm7309-201ENSMUST00000121670 581 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm14970-201ENSMUST00000122289 355 ntBASIC4.41□□□□□ -1.7
Sdc1P18828 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.41□□□□□ -1.7
Sdc1P18828 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc1P18828 Gm24402-201ENSMUST00000157873 91 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms