Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm24446-201ENSMUST00000083982 156 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Hoxd3P09027 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Hoxd3P09027 Tmem161b-206ENSMUST00000225069 2414 ntBASIC5.84□□□□□ -1.48
Hoxd3P09027 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hoxd3P09027 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Hoxd3P09027 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Hoxd3P09027 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hoxd3P09027 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm38380-201ENSMUST00000195718 2248 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm22470-201ENSMUST00000104117 130 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm17184-201ENSMUST00000111864 462 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm7910-201ENSMUST00000117896 835 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm14761-201ENSMUST00000121363 262 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm15167-201ENSMUST00000121997 187 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm11188-201ENSMUST00000122382 388 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm22035-201ENSMUST00000157284 228 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm22604-201ENSMUST00000157604 311 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Mir1981-201ENSMUST00000157934 82 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm27401-201ENSMUST00000184052 173 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm18505-201ENSMUST00000187360 790 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm9569-201ENSMUST00000187492 787 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm44356-201ENSMUST00000196731 111 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm5551-201ENSMUST00000199720 690 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm42584-201ENSMUST00000201404 220 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm7832-201ENSMUST00000202613 880 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm44163-201ENSMUST00000205140 475 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm45082-201ENSMUST00000206082 601 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm8489-201ENSMUST00000209876 1152 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm45438-201ENSMUST00000210242 564 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Diaph3-204ENSMUST00000226254 682 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm20900-201ENSMUST00000078729 472 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm22748-201ENSMUST00000082493 136 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm23503-201ENSMUST00000083903 107 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC5.83□□□□□ -1.48
Hoxd3P09027 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxd3P09027 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms