Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm7133-201ENSMUST00000187797 2039 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm22438-201ENSMUST00000104049 132 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm24986-201ENSMUST00000104452 132 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm5319-201ENSMUST00000118965 873 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm13603-201ENSMUST00000119404 83 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm13738-201ENSMUST00000122437 469 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm15242-201ENSMUST00000122459 283 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm22795-201ENSMUST00000157233 118 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Snora81-201ENSMUST00000157310 178 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm26349-201ENSMUST00000157530 130 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm23024-201ENSMUST00000158770 292 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm20430-201ENSMUST00000172474 207 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm27158-201ENSMUST00000183813 238 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm8458-201ENSMUST00000196658 819 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm43054-201ENSMUST00000199495 884 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm46994-201ENSMUST00000221523 219 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm6054-201ENSMUST00000078052 378 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Mir421-201ENSMUST00000083575 76 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm22019-201ENSMUST00000104359 96 ntBASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim39Q9ESN2 Gm11880-201ENSMUST00000117612 399 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms