Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm24230-201ENSMUST00000104313 129 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm26106-201ENSMUST00000157254 228 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm24685-201ENSMUST00000157764 285 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm22852-201ENSMUST00000177899 101 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm37681-201ENSMUST00000193880 727 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm44539-201ENSMUST00000206010 238 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm23330-201ENSMUST00000082660 164 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Mir331-201ENSMUST00000083673 96 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm26078-201ENSMUST00000104067 128 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm11970-201ENSMUST00000116105 320 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm11737-201ENSMUST00000118713 468 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm13533-201ENSMUST00000121104 177 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm14603-201ENSMUST00000121275 448 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm13531-201ENSMUST00000121893 543 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm26489-201ENSMUST00000157880 264 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm18348-201ENSMUST00000191227 820 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm37358-201ENSMUST00000195492 479 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm44319-201ENSMUST00000196974 93 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm43222-201ENSMUST00000199013 603 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm45157-201ENSMUST00000208729 401 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.29□□□□□ -1.4
Smc1aQ9CU62 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm26300-201ENSMUST00000102282 94 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm13493-201ENSMUST00000120318 493 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm11761-201ENSMUST00000121392 445 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm12293-201ENSMUST00000121898 590 ntBASIC6.28□□□□□ -1.4
Smc1aQ9CU62 Gm13214-201ENSMUST00000122137 408 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms