Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Lsm1Q8VC85 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm11852-201ENSMUST00000120806 222 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm23806-201ENSMUST00000175157 109 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm23617-201ENSMUST00000175410 95 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm22993-201ENSMUST00000175423 254 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm16531-201ENSMUST00000180658 967 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm27762-201ENSMUST00000183417 109 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm27679-201ENSMUST00000184612 84 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm44580-201ENSMUST00000206333 877 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm19921-201ENSMUST00000210505 703 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lsm1Q8VC85 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm15741-201ENSMUST00000119401 754 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm14805-201ENSMUST00000120172 340 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm6175-201ENSMUST00000121351 400 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm18343-201ENSMUST00000172802 604 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm37444-201ENSMUST00000193605 439 ntBASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.31□□□□□ -1.56
Lsm1Q8VC85 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms