Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm12244-201ENSMUST00000119500 291 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm25459-201ENSMUST00000157953 114 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm22210-201ENSMUST00000158101 144 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm16456-201ENSMUST00000174431 920 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm29489-201ENSMUST00000188934 324 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm38097-201ENSMUST00000192936 439 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm37599-201ENSMUST00000193067 489 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Brf1Q8CFK2 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm13473-201ENSMUST00000119289 367 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm14554-201ENSMUST00000119548 661 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm5405-201ENSMUST00000120478 609 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm12732-201ENSMUST00000121688 180 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm25445-201ENSMUST00000158996 299 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm29107-201ENSMUST00000190910 347 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm28640-201ENSMUST00000190918 550 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm9278-201ENSMUST00000205508 553 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm18205-201ENSMUST00000209215 841 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm25133-201ENSMUST00000082647 130 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Brf1Q8CFK2 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brf1Q8CFK2 Gm37965-201ENSMUST00000195304 1362 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 204.3 ms