Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Vps53Q8CCB4 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm15233-201ENSMUST00000118747 400 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm8545-201ENSMUST00000120692 801 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm11349-201ENSMUST00000122209 1116 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm24685-201ENSMUST00000157764 285 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm25906-201ENSMUST00000158489 126 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Mir3110-201ENSMUST00000175053 80 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm43478-201ENSMUST00000200381 292 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm7181-201ENSMUST00000202197 434 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm44108-201ENSMUST00000203525 422 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC158631.2-201ENSMUST00000219999 478 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC126043.1-201ENSMUST00000221304 1141 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm22971-201ENSMUST00000083305 97 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Vps53Q8CCB4 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Vps53Q8CCB4 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Vps53Q8CCB4 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Vps53Q8CCB4 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.71□□□□□ -1.33
Vps53Q8CCB4 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Vps53Q8CCB4 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.71□□□□□ -1.33
Vps53Q8CCB4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.71□□□□□ -1.33
Vps53Q8CCB4 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms