Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm22126-201ENSMUST00000083244 142 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Mir375-201ENSMUST00000083682 64 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.28□□□□□ -1.4
Trim9Q8C7M3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.27□□□□□ -1.4
Trim9Q8C7M3 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm11848-201ENSMUST00000121207 973 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm18343-201ENSMUST00000172802 604 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm2539-203ENSMUST00000181352 746 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 V1rg10-201ENSMUST00000183378 937 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm28437-201ENSMUST00000190277 783 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm20915-201ENSMUST00000191575 663 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm43550-201ENSMUST00000200597 303 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm18193-201ENSMUST00000210017 772 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Mir143-201ENSMUST00000083511 63 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Trim9Q8C7M3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm11821-201ENSMUST00000117335 979 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm15048-201ENSMUST00000118201 954 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm12465-201ENSMUST00000118591 300 ntBASIC6.26□□□□□ -1.41
Trim9Q8C7M3 Gm11447-201ENSMUST00000118983 858 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms