Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Mir5112-201ENSMUST00000174897 60 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm22993-201ENSMUST00000175423 254 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm19880-201ENSMUST00000207731 318 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AC153968.2-201ENSMUST00000215579 1140 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AC167202.1-201ENSMUST00000219027 331 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Mir375-201ENSMUST00000083682 64 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 AW046200-203ENSMUST00000211787 2479 ntBASIC6.3□□□□□ -1.4
Usp49Q6P9L4 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.3□□□□□ -1.4
Usp49Q6P9L4 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm23839-201ENSMUST00000116957 109 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm12073-201ENSMUST00000117382 524 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm15715-201ENSMUST00000118032 283 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Scarna10-201ENSMUST00000158992 325 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm23633-201ENSMUST00000175293 119 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm2429-201ENSMUST00000194635 586 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AV026068-220ENSMUST00000224153 1147 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AV026068-224ENSMUST00000224827 928 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp49Q6P9L4 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.29□□□□□ -1.4
Usp49Q6P9L4 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm5073-201ENSMUST00000118222 820 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm12901-201ENSMUST00000118690 532 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm11826-201ENSMUST00000118781 438 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm15741-201ENSMUST00000119401 754 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.28□□□□□ -1.4
Usp49Q6P9L4 Gm25047-201ENSMUST00000122667 104 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms