Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sp140Q6NSQ5 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm13731-201ENSMUST00000117332 196 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm14783-201ENSMUST00000118900 663 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm6446-201ENSMUST00000120604 818 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm15300-201ENSMUST00000122324 279 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm25013-201ENSMUST00000158402 128 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm26401-201ENSMUST00000158502 76 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm25839-201ENSMUST00000158921 103 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm24179-201ENSMUST00000158925 127 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm22693-201ENSMUST00000175049 442 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm26923-201ENSMUST00000182615 996 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm18611-201ENSMUST00000200334 1118 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm7181-201ENSMUST00000202197 434 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm31520-201ENSMUST00000203048 733 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm44688-201ENSMUST00000209083 537 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm19987-201ENSMUST00000216339 499 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 AC158981.3-201ENSMUST00000226844 1024 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.95□□□□□ -1.46
Sp140Q6NSQ5 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm12307-201ENSMUST00000120581 590 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm13578-201ENSMUST00000120849 590 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm8317-201ENSMUST00000121261 471 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm12322-201ENSMUST00000121605 389 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm15618-201ENSMUST00000121610 452 ntBASIC5.94□□□□□ -1.46
Sp140Q6NSQ5 Gm16471-201ENSMUST00000121940 618 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms