Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Col17a1Q07563 AC151904.4-201ENSMUST00000219868 1319 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm7206-201ENSMUST00000117730 508 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm43237-201ENSMUST00000196835 1044 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Gm45701-201ENSMUST00000212049 235 ntBASIC8.69□□□□□ -1.02
Col17a1Q07563 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Col17a1Q07563 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col17a1Q07563 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm25726-201ENSMUST00000104529 129 ntBASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm12854-201ENSMUST00000128518 297 ntBASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm21856-201ENSMUST00000187547 696 ntBASIC8.68□□□□□ -1.02
Col17a1Q07563 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC8.68□□□□□ -1.02
Col17a1Q07563 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Gm7665-201ENSMUST00000076710 297 ntBASIC8.68□□□□□ -1.02
Col17a1Q07563 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col17a1Q07563 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col17a1Q07563 AC121844.3-201ENSMUST00000219124 1785 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm6884-201ENSMUST00000119318 615 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm3788-201ENSMUST00000119949 136 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm13590-201ENSMUST00000120183 1588 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm14564-201ENSMUST00000122159 294 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm29036-201ENSMUST00000189967 877 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm37167-201ENSMUST00000194946 396 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Gm7990-201ENSMUST00000212126 593 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 AC153801.1-201ENSMUST00000217904 947 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 AC158803.3-201ENSMUST00000220024 211 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 AC154239.1-201ENSMUST00000228565 406 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col17a1Q07563 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Col17a1Q07563 AC144733.2-201ENSMUST00000222552 2292 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col17a1Q07563 AC132852.1-201ENSMUST00000214683 2324 ntBASIC8.67□□□□□ -1.02
Col17a1Q07563 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col17a1Q07563 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col17a1Q07563 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col17a1Q07563 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm14539-201ENSMUST00000117527 174 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm7312-201ENSMUST00000118798 469 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm7079-201ENSMUST00000119726 171 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm13745-201ENSMUST00000121994 527 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm8614-201ENSMUST00000182528 978 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm42542-201ENSMUST00000197978 268 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm44002-201ENSMUST00000205134 594 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Col17a1Q07563 Gm7439-201ENSMUST00000214053 835 ntBASIC8.66□□□□□ -1.02
Col17a1Q07563 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col17a1Q07563 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms