Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.24□□□□□ -1.41
Msx2Q03358 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Msx2Q03358 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Msx2Q03358 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msx2Q03358 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.24□□□□□ -1.41
Msx2Q03358 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.24□□□□□ -1.41
Msx2Q03358 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Msx2Q03358 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Msx2Q03358 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.24□□□□□ -1.41
Msx2Q03358 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Mir503-201ENSMUST00000102168 71 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm11903-201ENSMUST00000118958 727 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm14887-201ENSMUST00000119522 663 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm3835-201ENSMUST00000120752 403 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm11689-201ENSMUST00000120766 302 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm12903-201ENSMUST00000121015 544 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm24635-201ENSMUST00000122712 128 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm23025-201ENSMUST00000158769 111 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm7393-201ENSMUST00000172650 739 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm27152-201ENSMUST00000183828 99 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Mir6951-201ENSMUST00000183910 75 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm37270-201ENSMUST00000194277 330 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm18971-201ENSMUST00000197240 374 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Msx2Q03358 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Msx2Q03358 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.23□□□□□ -1.41
Msx2Q03358 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Msx2Q03358 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Msx2Q03358 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Msx2Q03358 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.22□□□□□ -1.41
Msx2Q03358 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Msx2Q03358 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Msx2Q03358 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Gm12094-201ENSMUST00000121781 472 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Gm15187-201ENSMUST00000122329 264 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Gm23883-201ENSMUST00000122686 290 ntBASIC6.22□□□□□ -1.41
Msx2Q03358 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.22□□□□□ -1.41
Msx2Q03358 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.22□□□□□ -1.41
Msx2Q03358 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms