Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm18689-201ENSMUST00000203969 902 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm8106-201ENSMUST00000213123 523 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Gm4928-201ENSMUST00000219622 850 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1bP97952 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Snord59a-201ENSMUST00000082844 74 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scn1bP97952 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn1bP97952 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Scn1bP97952 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.18□□□□□ -1.58
Scn1bP97952 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Scn1bP97952 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm12504-202ENSMUST00000148026 306 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm25846-201ENSMUST00000158013 135 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm9294-201ENSMUST00000165198 789 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm19280-201ENSMUST00000190191 205 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm37684-201ENSMUST00000192779 355 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm37341-201ENSMUST00000194680 371 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm37102-201ENSMUST00000195740 1105 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm37908-201ENSMUST00000195828 470 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1bP97952 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm18290-201ENSMUST00000202900 844 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm45448-201ENSMUST00000211739 209 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 AC122924.1-201ENSMUST00000222044 163 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.17□□□□□ -1.58
Scn1bP97952 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1bP97952 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scn1bP97952 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scn1bP97952 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn1bP97952 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn1bP97952 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1bP97952 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1bP97952 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn1bP97952 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.16□□□□□ -1.58
Scn1bP97952 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn1bP97952 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms