Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
Traf1P39428 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.59□□□□□ -1.35
Traf1P39428 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Traf1P39428 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Mir466j-201ENSMUST00000116876 122 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm16200-201ENSMUST00000120385 331 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm15044-201ENSMUST00000120703 598 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm15152-201ENSMUST00000121540 394 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm7309-201ENSMUST00000121670 581 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm12732-201ENSMUST00000121688 180 ntBASIC6.59□□□□□ -1.35
Traf1P39428 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm23229-201ENSMUST00000157297 105 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm4845-201ENSMUST00000179202 562 ntBASIC6.59□□□□□ -1.35
Traf1P39428 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Traf1P39428 Mir7687-201ENSMUST00000184722 59 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm44623-201ENSMUST00000207934 434 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm45574-201ENSMUST00000210921 331 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm45874-201ENSMUST00000212423 346 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm18705-201ENSMUST00000215985 913 ntBASIC6.59□□□□□ -1.35
Traf1P39428 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm23927-201ENSMUST00000082466 215 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm23330-201ENSMUST00000082660 164 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.59□□□□□ -1.35
Traf1P39428 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Traf1P39428 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.59□□□□□ -1.35
Traf1P39428 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.59□□□□□ -1.36
Traf1P39428 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.58□□□□□ -1.36
Traf1P39428 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Traf1P39428 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.58□□□□□ -1.36
Traf1P39428 Gm13451-201ENSMUST00000117649 592 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm6427-201ENSMUST00000118721 979 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm14521-201ENSMUST00000119545 350 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm5405-201ENSMUST00000120478 609 ntBASIC6.58□□□□□ -1.36
Traf1P39428 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.58□□□□□ -1.36
Traf1P39428 Mir1970-201ENSMUST00000157839 104 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Gm2979-201ENSMUST00000193442 463 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.58□□□□□ -1.36
Traf1P39428 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.58□□□□□ -1.36
Traf1P39428 Gm6702-201ENSMUST00000208496 471 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Gm19196-201ENSMUST00000209258 357 ntBASIC6.58□□□□□ -1.36
Traf1P39428 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Traf1P39428 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Traf1P39428 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.58□□□□□ -1.36
Traf1P39428 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Traf1P39428 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.57□□□□□ -1.36
Traf1P39428 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Traf1P39428 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Traf1P39428 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Traf1P39428 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Traf1P39428 Gm15741-201ENSMUST00000119401 754 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Gm12650-201ENSMUST00000121966 258 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Traf1P39428 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Traf1P39428 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.57□□□□□ -1.36
Traf1P39428 Gm26069-201ENSMUST00000157497 277 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Gm22596-201ENSMUST00000157601 316 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Traf1P39428 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.57□□□□□ -1.36
Traf1P39428 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.57□□□□□ -1.36
Traf1P39428 Gm37293-201ENSMUST00000191658 295 ntBASIC6.57□□□□□ -1.36
Traf1P39428 Gm35648-201ENSMUST00000202304 475 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms