Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm24402-201ENSMUST00000157873 91 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Gm23318-201ENSMUST00000158000 108 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Gm3170-201ENSMUST00000168753 850 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm3348-201ENSMUST00000177813 850 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Mir7222-201ENSMUST00000183740 75 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Gm6631-201ENSMUST00000193699 559 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm44261-201ENSMUST00000203337 209 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Gm3266-201ENSMUST00000217832 591 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC4.8□□□□□ -1.64
Nedd8P29595 AC154757.2-201ENSMUST00000228885 743 ntBASIC4.8□□□□□ -1.64
Nedd8P29595 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Nedd8P29595 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.8□□□□□ -1.64
Nedd8P29595 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.8□□□□□ -1.64
Nedd8P29595 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nedd8P29595 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Nedd8P29595 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nedd8P29595 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm13114-201ENSMUST00000117605 106 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15765-201ENSMUST00000118407 910 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm22492-201ENSMUST00000157192 297 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm24944-201ENSMUST00000158330 128 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Mir5100-201ENSMUST00000174993 64 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15257-201ENSMUST00000177680 883 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15252-201ENSMUST00000177750 883 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15260-201ENSMUST00000179402 883 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nedd8P29595 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm7492-201ENSMUST00000201745 725 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm44251-201ENSMUST00000204963 442 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm19900-201ENSMUST00000207285 576 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm45596-201ENSMUST00000209279 434 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC4.79□□□□□ -1.64
Nedd8P29595 AC124601.1-201ENSMUST00000220531 135 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.79□□□□□ -1.64
Nedd8P29595 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AC131033.1-201ENSMUST00000228223 279 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 AC123665.3-201ENSMUST00000228735 1216 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.79□□□□□ -1.64
Nedd8P29595 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.79□□□□□ -1.64
Nedd8P29595 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nedd8P29595 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.78□□□□□ -1.64
Nedd8P29595 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm25795-201ENSMUST00000104421 132 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Gm14560-201ENSMUST00000118672 375 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Gm12820-201ENSMUST00000119233 342 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm25714-201ENSMUST00000158626 296 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Gm23050-201ENSMUST00000158775 165 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nedd8P29595 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nedd8P29595 Gm24812-201ENSMUST00000175315 284 ntBASIC4.78□□□□□ -1.64
Nedd8P29595 Gm26057-201ENSMUST00000178099 165 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms