Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm22655-201ENSMUST00000174949 96 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm6055-201ENSMUST00000180532 378 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm27004-201ENSMUST00000183300 727 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Mir7211-201ENSMUST00000184071 63 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm6693-201ENSMUST00000189583 813 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm36939-201ENSMUST00000194889 439 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 AC211878.6-201ENSMUST00000221896 358 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm7557-201ENSMUST00000221935 865 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Gm272-201ENSMUST00000222073 919 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 CT025598.1-201ENSMUST00000225140 427 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm5612-201ENSMUST00000053326 375 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.64□□□□□ -1.67
Cdx1P18111 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdx1P18111 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Cdx1P18111 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm15781-201ENSMUST00000120216 323 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm22548-201ENSMUST00000174899 78 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm23632-201ENSMUST00000175289 125 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm9529-201ENSMUST00000177598 579 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm21139-201ENSMUST00000186594 877 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm37430-201ENSMUST00000193039 196 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm37030-201ENSMUST00000194254 295 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm18482-201ENSMUST00000202405 760 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm19596-201ENSMUST00000203685 739 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm7570-201ENSMUST00000215246 698 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx1P18111 AC154563.1-201ENSMUST00000228317 442 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx1P18111 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm10221-201ENSMUST00000088299 309 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Cdx1P18111 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdx1P18111 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Cdx1P18111 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.63□□□□□ -1.67
Cdx1P18111 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx1P18111 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdx1P18111 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms